STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR55482.1Phenylacetate--CoA ligase; KEGG: mmp:MMP0715 coenzyme F390 synthetase II. (432 aa)    
Predicted Functional Partners:
ABR55222.1
Phenylacetate--CoA ligase; KEGG: mmp:MMP0314 coenzyme F390 synthetase.
  
  
 
0.904
ABR55063.1
Phenylacetate--CoA ligase; KEGG: mmp:MMP0160 coenzyme F390 synthetase.
  
  
 
0.902
ABR55483.1
PFAM: amino acid-binding ACT domain protein; KEGG: mmp:MMP0716 acetohydroxyacid synthase small subunit related.
 
   0.879
ABR54073.1
PFAM: aldehyde dehydrogenase; KEGG: chu:CHU_0301 gyceraldehyde-3-phosphate dehydrogenase (NADP+).
  
 
 0.835
ABR54702.1
Aldehyde dehydrogenase; Involved in F420 biosynthesis through the oxidation of lactaldehyde to lactate.
  
 
 0.835
ABR55481.1
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: mmp:MMP0714 indolepyruvate oxidoreductase subunit beta 2.
  
  
 0.833
ABR55480.1
Thiamine pyrophosphate protein domain protein TPP-binding; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
  
  
 0.800
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.481
ABR54434.1
PFAM: Thiolase; KEGG: mmp:MMP1212 acetyl-CoA acyltransferase.
  
  
 0.409
Your Current Organism:
Methanococcus vannielii
NCBI taxonomy Id: 406327
Other names: M. vannielii SB, Methanococcus vannielii SB, Methanococcus vannielii str. SB, Methanococcus vannielii strain SB
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