STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DK26_02860Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)    
Predicted Functional Partners:
DK26_14215
CtpF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.808
DK26_14230
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.803
DK26_02865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
DK26_14205
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.762
DK26_02855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
flbT
Post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.637
DK26_14200
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.622
DK26_12075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.595
DK26_14210
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
DK26_14235
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.532
Your Current Organism:
Bosea sp. WAO
NCBI taxonomy Id: 406341
Other names: B. sp. WAO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.