STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DK26_07630AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)    
Predicted Functional Partners:
DK26_16425
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.706
DK26_21890
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.694
DK26_07625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.689
DK26_20610
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.627
DK26_24550
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.595
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
  0.544
DK26_07640
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
DK26_07635
Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
DK26_07645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
DK26_25640
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
 0.505
Your Current Organism:
Bosea sp. WAO
NCBI taxonomy Id: 406341
Other names: B. sp. WAO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.