STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DK26_12680Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (704 aa)    
Predicted Functional Partners:
DK26_12675
Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.985
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.832
DK26_25715
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.
  
 
 0.832
DK26_12685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.795
DK26_06400
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.792
DK26_01590
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.771
lldD
Lactate dehydrogenase; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.771
DK26_17835
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.771
DK26_06555
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.761
DK26_15320
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.761
Your Current Organism:
Bosea sp. WAO
NCBI taxonomy Id: 406341
Other names: B. sp. WAO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.