STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DK26_20010S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (278 aa)    
Predicted Functional Partners:
DK26_20005
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
DK26_15620
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.992
DK26_20000
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.866
DK26_24175
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.762
DK26_12465
NADH-quinone oxidoreductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.749
DK26_08815
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.735
DK26_18425
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.715
DK26_25705
ATP synthase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.705
DK26_25760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.697
DK26_24730
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.695
Your Current Organism:
Bosea sp. WAO
NCBI taxonomy Id: 406341
Other names: B. sp. WAO
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