STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DK26_27705Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
DK26_01420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
DK26_24835
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
DK26_09495
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.958
DK26_19255
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.915
DK26_09490
Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.900
DK26_24030
Arsenite oxidase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.900
DK26_17715
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
DK26_02550
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.882
DK26_21475
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.863
DK26_26890
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.863
Your Current Organism:
Bosea sp. WAO
NCBI taxonomy Id: 406341
Other names: B. sp. WAO
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