Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NJ7G_0891 | NJ7G_1127 | NJ7G_0891 | NJ7G_1127 | Nucleic acid binding OB-fold tRNA/helicase-type. | Hypothetical protein. | 0.620 |
NJ7G_0891 | gch3 | NJ7G_0891 | NJ7G_0632 | Nucleic acid binding OB-fold tRNA/helicase-type. | GTP cyclohydrolase III; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family. | 0.542 |
NJ7G_0891 | gch3-2 | NJ7G_0891 | NJ7G_3305 | Nucleic acid binding OB-fold tRNA/helicase-type. | GTP cyclohydrolase IIa; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family. | 0.561 |
NJ7G_0891 | purO | NJ7G_0891 | NJ7G_0427 | Nucleic acid binding OB-fold tRNA/helicase-type. | IMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP. | 0.704 |
NJ7G_1127 | NJ7G_0891 | NJ7G_1127 | NJ7G_0891 | Hypothetical protein. | Nucleic acid binding OB-fold tRNA/helicase-type. | 0.620 |
NJ7G_1127 | gch3 | NJ7G_1127 | NJ7G_0632 | Hypothetical protein. | GTP cyclohydrolase III; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family. | 0.409 |
NJ7G_1127 | gch3-2 | NJ7G_1127 | NJ7G_3305 | Hypothetical protein. | GTP cyclohydrolase IIa; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family. | 0.414 |
NJ7G_1127 | purO | NJ7G_1127 | NJ7G_0427 | Hypothetical protein. | IMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP. | 0.699 |
NJ7G_2238 | NJ7G_4041 | NJ7G_2238 | NJ7G_4041 | GMP reductase. | Phosphoribosylglycinamide formyltransferase. | 0.888 |
NJ7G_2238 | guaB | NJ7G_2238 | NJ7G_0800 | GMP reductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.910 |
NJ7G_2238 | purA | NJ7G_2238 | NJ7G_3123 | GMP reductase. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.984 |
NJ7G_2238 | purO | NJ7G_2238 | NJ7G_0427 | GMP reductase. | IMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP. | 0.924 |
NJ7G_2238 | surE | NJ7G_2238 | NJ7G_3169 | GMP reductase. | Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.933 |
NJ7G_2238 | surE-2 | NJ7G_2238 | NJ7G_3762 | GMP reductase. | Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.935 |
NJ7G_4041 | NJ7G_2238 | NJ7G_4041 | NJ7G_2238 | Phosphoribosylglycinamide formyltransferase. | GMP reductase. | 0.888 |
NJ7G_4041 | guaB | NJ7G_4041 | NJ7G_0800 | Phosphoribosylglycinamide formyltransferase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.906 |
NJ7G_4041 | purA | NJ7G_4041 | NJ7G_3123 | Phosphoribosylglycinamide formyltransferase. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.997 |
NJ7G_4041 | purO | NJ7G_4041 | NJ7G_0427 | Phosphoribosylglycinamide formyltransferase. | IMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP. | 0.982 |
NJ7G_4041 | surE | NJ7G_4041 | NJ7G_3169 | Phosphoribosylglycinamide formyltransferase. | Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.551 |
NJ7G_4041 | surE-2 | NJ7G_4041 | NJ7G_3762 | Phosphoribosylglycinamide formyltransferase. | Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.551 |
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