STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NJ7G_1169Amino acid permease-associated region. (487 aa)    
Predicted Functional Partners:
NJ7G_0366
Ammonium transporter; Belongs to the P(II) protein family.
  
 
 0.569
NJ7G_3467
UspA domain protein.
    0.562
NJ7G_1170
Hypothetical protein.
       0.509
NJ7G_1165
Cys/Met metabolism pyridoxal-phosphate-dependent protein.
 
 
 
 0.485
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
  
   0.453
NJ7G_0949
Sodium:dicarboxylate symporter.
 
 
 0.422
rpl21e
Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
       0.418
NJ7G_1168
RNA polymerase Rpb4.
       0.418
NJ7G_2647
Sodium:dicarboxylate symporter.
 
 
 0.418
NJ7G_1830
Sodium/hydrogen exchanger.
 
 
 
 0.415
Your Current Organism:
Natrinema sp. J72
NCBI taxonomy Id: 406552
Other names: N. sp. J7-2, Natrinema sp. J7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.