STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NJ7G_1666Zinc finger SWIM domain protein. (118 aa)    
Predicted Functional Partners:
NJ7G_0728
Hypothetical protein.
  
     0.728
NJ7G_2028
Hypothetical protein.
  
     0.724
NJ7G_2027
Hypothetical protein.
  
     0.723
NJ7G_3517
Type II secretion system F domain protein.
  
     0.712
NJ7G_2410
Amino acid-binding ACT domain protein.
  
     0.698
NJ7G_0536
Peptidase A24B, FlaK domain protein.
  
     0.686
trm1
N2N2-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
 
     0.685
NJ7G_2835
Hypothetical protein; Belongs to the UPF0146 family.
  
     0.685
NJ7G_2762
DNA-binding protein, Tfx family.
 
     0.661
NJ7G_0757
Hypothetical protein.
  
     0.637
Your Current Organism:
Natrinema sp. J72
NCBI taxonomy Id: 406552
Other names: N. sp. J7-2, Natrinema sp. J7-2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.