STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NJ7G_1963MaoC domain protein dehydratase. (158 aa)    
Predicted Functional Partners:
NJ7G_1917
Hypothetical protein.
  
  
 0.475
NJ7G_1919
Monoamine oxidase regulatory protein.
  
     0.460
NJ7G_0783
Hypothetical protein.
  
 
 0.454
NJ7G_2316
Hypothetical protein.
  
 
 0.454
NJ7G_0182
AMP-dependent synthetase and ligase.
 
  
 0.426
NJ7G_1962
Hypothetical protein.
       0.426
NJ7G_1890
MaoC domain protein dehydratase.
  
     0.419
NJ7G_1979
biotin/acetyl-CoA-carboxylase ligase.
  
    0.419
NJ7G_0114
acetyl-CoA acetyltransferase.
  
 
 0.411
NJ7G_0174
acetyl-CoA acetyltransferase.
  
 
 0.411
Your Current Organism:
Natrinema sp. J72
NCBI taxonomy Id: 406552
Other names: N. sp. J7-2, Natrinema sp. J7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.