STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NJ7G_2148Biotin/lipoate A/B protein ligase. (278 aa)    
Predicted Functional Partners:
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 
 0.934
NJ7G_0689
Biotin/lipoate A/B protein ligase.
  
  
  0.918
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 
 0.893
NJ7G_0034
Dihydrolipoyllysine-residue acetyltransferase.
 
 0.854
NJ7G_0035
Pyruvate dehydrogenase E1 component,subunit beta.
 
 
 0.816
NJ7G_0036
Pyruvate dehydrogenase E1 component, alpha subunit.
 
 
 0.774
NJ7G_0008
Dihydrolipoamide dehydrogenase.
 
 
 0.707
NJ7G_0840
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.689
NJ7G_0841
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.689
NJ7G_2646
Chlorite dismutase.
 
   
 0.526
Your Current Organism:
Natrinema sp. J72
NCBI taxonomy Id: 406552
Other names: N. sp. J7-2, Natrinema sp. J7-2
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