STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NJ7G_3058NADH:flavin oxidoreductase/NADH oxidase. (363 aa)    
Predicted Functional Partners:
NJ7G_0425
NADH:flavin oxidoreductase/NADH oxidase.
 
     0.753
NJ7G_1577
Electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.608
NJ7G_2766
Electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.608
NJ7G_1578
Electron transfer flavoprotein alpha subunit.
   
 
 0.575
NJ7G_2767
Electron transfer flavoprotein alpha subunit.
   
 
 0.575
NJ7G_3057
Photosystem I assembly BtpA.
       0.557
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.470
rad25
Type III restriction protein res subunit.
  
  
 0.435
NJ7G_4251
Aldo/keto reductase.
 
  
 0.407
Your Current Organism:
Natrinema sp. J72
NCBI taxonomy Id: 406552
Other names: N. sp. J7-2, Natrinema sp. J7-2
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