Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NJ7G_0366 | NJ7G_1520 | NJ7G_0366 | NJ7G_1520 | Ammonium transporter; Belongs to the P(II) protein family. | Thioredoxin reductase. | 0.718 |
NJ7G_0366 | NJ7G_3512 | NJ7G_0366 | NJ7G_3512 | Ammonium transporter; Belongs to the P(II) protein family. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | 0.574 |
NJ7G_0366 | tatA | NJ7G_0366 | NJ7G_3513 | Ammonium transporter; Belongs to the P(II) protein family. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.559 |
NJ7G_1520 | NJ7G_0366 | NJ7G_1520 | NJ7G_0366 | Thioredoxin reductase. | Ammonium transporter; Belongs to the P(II) protein family. | 0.718 |
NJ7G_1520 | NJ7G_3512 | NJ7G_1520 | NJ7G_3512 | Thioredoxin reductase. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | 0.405 |
NJ7G_3511 | NJ7G_3512 | NJ7G_3511 | NJ7G_3512 | Metal-dependent phosphohydrolase HD sub domain protein. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | 0.668 |
NJ7G_3511 | tatA | NJ7G_3511 | NJ7G_3513 | Metal-dependent phosphohydrolase HD sub domain protein. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.520 |
NJ7G_3512 | NJ7G_0366 | NJ7G_3512 | NJ7G_0366 | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | Ammonium transporter; Belongs to the P(II) protein family. | 0.574 |
NJ7G_3512 | NJ7G_1520 | NJ7G_3512 | NJ7G_1520 | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | Thioredoxin reductase. | 0.405 |
NJ7G_3512 | NJ7G_3511 | NJ7G_3512 | NJ7G_3511 | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | Metal-dependent phosphohydrolase HD sub domain protein. | 0.668 |
NJ7G_3512 | tatA | NJ7G_3512 | NJ7G_3513 | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.508 |
tatA | NJ7G_0366 | NJ7G_3513 | NJ7G_0366 | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Ammonium transporter; Belongs to the P(II) protein family. | 0.559 |
tatA | NJ7G_3511 | NJ7G_3513 | NJ7G_3511 | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Metal-dependent phosphohydrolase HD sub domain protein. | 0.520 |
tatA | NJ7G_3512 | NJ7G_3513 | NJ7G_3512 | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. | 0.508 |