STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XNC1_1232Putative threonine dehydratase, catabolic, PLP-dependent. (322 aa)    
Predicted Functional Partners:
ilvH
Acetolactate synthase III, valine-sensitive, small subunit.
  
 
 0.803
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.780
XNC1_0523
Putative translation initiation inhibitor (YjgF).
 
 0.773
thrC
Threonine synthase; Function experimentally demonstrated in the studied strain; enzyme.
  
 
 0.749
metL
Bifunctional: aspartokinase II (N-terminal); homoserine dehydrogenase II (C-terminal), methionine sensitive.
  
 
 0.738
thrA
Bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal), threonine sensitive.
  
 
 0.738
XNC1_0368
Acetolactate synthase isozyme II large subunit (AHAS-II) (Acetohydroxy-acid synthase II large subunit) (ALS-II).
 
 0.693
ilvI
Acetolactate synthase III, valine-sensitive, large subunit.
 
 0.678
ilvM
Acetolactate synthase II, small subunit.
  
 
 0.628
gltB
Glutamate synthase, large subunit.
  
 
 0.592
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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