Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XNC1_1782 | XNC1_1783 | XNC1_1782 | XNC1_1783 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.947 |
XNC1_1782 | XNC1_1784 | XNC1_1782 | XNC1_1784 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.470 |
XNC1_1782 | XNC1_1785 | XNC1_1782 | XNC1_1785 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Conserved hypothetical protein. | 0.470 |
XNC1_1782 | XNC1_1999 | XNC1_1782 | XNC1_1999 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.787 |
XNC1_1782 | XNC1_3413 | XNC1_1782 | XNC1_3413 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Hypothetical protein; No homology to any previously reported sequences. | 0.582 |
XNC1_1782 | XNC1_3687 | XNC1_1782 | XNC1_3687 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.787 |
XNC1_1782 | XNC1_4272 | XNC1_1782 | XNC1_4272 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.787 |
XNC1_1782 | dnaB | XNC1_1782 | XNC1_3531 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.464 |
XNC1_1782 | dnaB-2 | XNC1_1782 | XNC1_3642 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.464 |
XNC1_1782 | polA | XNC1_1782 | XNC1_4331 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.488 |
XNC1_1783 | XNC1_1782 | XNC1_1783 | XNC1_1782 | Transposase. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.947 |
XNC1_1783 | XNC1_1784 | XNC1_1783 | XNC1_1784 | Transposase. | Transposase. | 0.476 |
XNC1_1783 | XNC1_1785 | XNC1_1783 | XNC1_1785 | Transposase. | Conserved hypothetical protein. | 0.476 |
XNC1_1784 | XNC1_1782 | XNC1_1784 | XNC1_1782 | Transposase. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.470 |
XNC1_1784 | XNC1_1783 | XNC1_1784 | XNC1_1783 | Transposase. | Transposase. | 0.476 |
XNC1_1784 | XNC1_1785 | XNC1_1784 | XNC1_1785 | Transposase. | Conserved hypothetical protein. | 0.945 |
XNC1_1785 | XNC1_1782 | XNC1_1785 | XNC1_1782 | Conserved hypothetical protein. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.470 |
XNC1_1785 | XNC1_1783 | XNC1_1785 | XNC1_1783 | Conserved hypothetical protein. | Transposase. | 0.476 |
XNC1_1785 | XNC1_1784 | XNC1_1785 | XNC1_1784 | Conserved hypothetical protein. | Transposase. | 0.945 |
XNC1_1999 | XNC1_1782 | XNC1_1999 | XNC1_1782 | Transposase. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.787 |
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