Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
XNC1_1782 | XNC1_1783 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.947 |
XNC1_1782 | XNC1_1784 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Transposase. | 0.470 |
XNC1_1782 | XNC1_1785 | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | Conserved hypothetical protein. | 0.470 |
XNC1_1783 | XNC1_1782 | Transposase. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.947 |
XNC1_1783 | XNC1_1784 | Transposase. | Transposase. | 0.476 |
XNC1_1783 | XNC1_1785 | Transposase. | Conserved hypothetical protein. | 0.476 |
XNC1_1784 | XNC1_1782 | Transposase. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.470 |
XNC1_1784 | XNC1_1783 | Transposase. | Transposase. | 0.476 |
XNC1_1784 | XNC1_1785 | Transposase. | Conserved hypothetical protein. | 0.945 |
XNC1_1784 | XNC1_1908 | Transposase. | Transposase (fragment). | 0.772 |
XNC1_1784 | XNC1_1911 | Transposase. | Hypothetical protein. | 0.735 |
XNC1_1784 | XNC1_2180 | Transposase. | Transposase (fragment). | 0.772 |
XNC1_1784 | XNC1_2420 | Transposase. | Hypothetical protein. | 0.715 |
XNC1_1784 | XNC1_3000 | Transposase. | Transposase (fragment). | 0.772 |
XNC1_1784 | XNC1_3682 | Transposase. | Transposase (fragment). | 0.772 |
XNC1_1784 | XNC1_4455 | Transposase. | Conserved hypothetical protein. | 0.775 |
XNC1_1785 | XNC1_1782 | Conserved hypothetical protein. | Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA. | 0.470 |
XNC1_1785 | XNC1_1783 | Conserved hypothetical protein. | Transposase. | 0.476 |
XNC1_1785 | XNC1_1784 | Conserved hypothetical protein. | Transposase. | 0.945 |
XNC1_1785 | XNC1_1911 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
page 1 of 3