Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XNC1_0647 | XNC1_1756 | XNC1_0647 | XNC1_1756 | Conserved hypothetical protein. | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.823 |
XNC1_0647 | XNC1_1763 | XNC1_0647 | XNC1_1763 | Conserved hypothetical protein. | Putative Phenylalanine racemase (ATP-hydrolyzing). | 0.983 |
XNC1_0647 | XNC1_1764 | XNC1_0647 | XNC1_1764 | Conserved hypothetical protein. | Hypothetical protein. | 0.841 |
XNC1_0647 | XNC1_2157 | XNC1_0647 | XNC1_2157 | Conserved hypothetical protein. | Phenylalanine racemase (ATP-hydrolyzing)(polyketide synthase); Function of strongly homologous gene; enzyme. | 0.976 |
XNC1_0647 | XNC1_2162 | XNC1_0647 | XNC1_2162 | Conserved hypothetical protein. | Thioesterase (fragment). | 0.692 |
XNC1_0647 | XNC1_2228 | XNC1_0647 | XNC1_2228 | Conserved hypothetical protein. | Peptide synthetase; Function of strongly homologous gene; enzyme. | 0.803 |
XNC1_0647 | XNC1_2269 | XNC1_0647 | XNC1_2269 | Conserved hypothetical protein. | Hypothetical protein. | 0.860 |
XNC1_0647 | xcnF | XNC1_0647 | XNC1_1706 | Conserved hypothetical protein. | Polyketide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. | 0.857 |
XNC1_0647 | xcnI | XNC1_0647 | XNC1_1703 | Conserved hypothetical protein. | Thioesterase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. | 0.685 |
XNC1_0647 | xcnL | XNC1_0647 | XNC1_1700 | Conserved hypothetical protein. | Polyketide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. | 0.506 |
XNC1_1756 | XNC1_0647 | XNC1_1756 | XNC1_0647 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein. | 0.823 |
XNC1_1756 | XNC1_1763 | XNC1_1756 | XNC1_1763 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative Phenylalanine racemase (ATP-hydrolyzing). | 0.895 |
XNC1_1756 | XNC1_1764 | XNC1_1756 | XNC1_1764 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein. | 0.810 |
XNC1_1756 | XNC1_2157 | XNC1_1756 | XNC1_2157 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Phenylalanine racemase (ATP-hydrolyzing)(polyketide synthase); Function of strongly homologous gene; enzyme. | 0.953 |
XNC1_1756 | XNC1_2162 | XNC1_1756 | XNC1_2162 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Thioesterase (fragment). | 0.856 |
XNC1_1756 | XNC1_2228 | XNC1_1756 | XNC1_2228 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Peptide synthetase; Function of strongly homologous gene; enzyme. | 0.930 |
XNC1_1756 | XNC1_2269 | XNC1_1756 | XNC1_2269 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein. | 0.903 |
XNC1_1756 | xcnI | XNC1_1756 | XNC1_1703 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Thioesterase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. | 0.857 |
XNC1_1756 | xcnL | XNC1_1756 | XNC1_1700 | Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Polyketide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. | 0.520 |
XNC1_1763 | XNC1_0647 | XNC1_1763 | XNC1_0647 | Putative Phenylalanine racemase (ATP-hydrolyzing). | Conserved hypothetical protein. | 0.983 |
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