STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XNC1_2826Putative phosphotransferase enzyme II, A component SgcA. (147 aa)    
Predicted Functional Partners:
XNC1_2827
Putative sugar phosphotransferase component II B.
 
 
 0.994
ulaA
PTS family enzyme IIC, ascorbate-specific.
 
 
 0.994
ptsH
PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase.
 
 
 0.925
fruK
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.717
nagE
PTS family enzyme IIC (N-terminal); enzyme IIB (center); enzyme IIA (C-terminal), N-acetylglucosamine-specific.
  
  
 0.666
yfeV
Putative PTS family enzyme IIBC with sucrose/glucose-specific domain.
  
  
 0.665
treB
PTS family enzyme IIBC, trehalose(maltose)-specific.
  
  
 0.659
manX
PTS family enzyme IIA (N-terminal); enzyme IIB (C-terminal), mannose-specific.
 
  
 0.613
rapZ
Conserved hypothetical protein; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily.
  
  
 0.585
betT-2
High-affinity choline transport protein (BCCT family); Belongs to the BCCT transporter (TC 2.A.15) family.
       0.461
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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