STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XBJ1_0194Putative glutamate/aspartate transport protein (ABC superfamily, membrane). (245 aa)    
Predicted Functional Partners:
XBJ1_0195
Putative high-affinity glutamine transport protein (ABC superfamily, membrane).
 
 
 
0.986
artI
Arginine transport protein (ABC superfamily, peri_bind); Belongs to the bacterial solute-binding protein 3 family.
 
 0.970
XBJ1_0193
Putative amino acid-binding protein (ABC superfamily, peri_bind); Belongs to the bacterial solute-binding protein 3 family.
 
 0.931
gltL
Glutamate/aspartate transport protein (ABC superfamily, atp_bind).
 
 0.914
yecC
Putative amino acid transport protein (ABC superfamily, atp_bind).
 
 0.905
fliY
Cysteine transport protein (ABC superfamily, peri_bind).
 
 0.892
XBJ1_0435
Putative cysteine transport protein (ABC superfamily, peri_bind); Belongs to the bacterial solute-binding protein 3 family.
 
     0.790
gltI
Glutamate/aspartate transport protein (ABC superfamily, peri_bind).
 
 
 0.780
artP
Arginine transport protein (ABC superfamily, atp_bind).
 
     0.754
gltK
Glutamate/aspartate transport protein (ABC superfamily, membrane).
 
 
 
0.616
Your Current Organism:
Xenorhabdus bovienii
NCBI taxonomy Id: 406818
Other names: X. bovienii SS-2004, Xenorhabdus bovienii SS-2004, Xenorhabdus bovienii str. SS-2004, Xenorhabdus bovienii strain SS-2004
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