Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XBJ1_0775 | XBJ1_1966 | XBJ1_0775 | XBJ1_1966 | Putative Ornithine racemase. | Transposase (fragment); Gene remnant; enzyme. | 0.999 |
| XBJ1_0775 | XBJ1_1968 | XBJ1_0775 | XBJ1_1968 | Putative Ornithine racemase. | Putative Ornithine racemase. | 0.999 |
| XBJ1_0775 | XBJ1_2152 | XBJ1_0775 | XBJ1_2152 | Putative Ornithine racemase. | Peptide synthetase XpsB. | 0.999 |
| XBJ1_0775 | dnaK | XBJ1_0775 | XBJ1_1742 | Putative Ornithine racemase. | Chaperone Hsp70 in DNA biosynthesis/cell division; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.422 |
| XBJ1_0775 | msbA | XBJ1_0775 | XBJ1_0810 | Putative Ornithine racemase. | Lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.616 |
| XBJ1_1092 | XBJ1_1094 | XBJ1_1092 | XBJ1_1094 | RTX toxin ABC transporter (IM-ABC) protein RtxB; Function of strongly homologous gene; enzyme. | Putative RTX toxin secretion ATP-binding protein; Doubtful CDS; enzyme. | 0.867 |
| XBJ1_1092 | msbA | XBJ1_1092 | XBJ1_0810 | RTX toxin ABC transporter (IM-ABC) protein RtxB; Function of strongly homologous gene; enzyme. | Lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.722 |
| XBJ1_1094 | XBJ1_1092 | XBJ1_1094 | XBJ1_1092 | Putative RTX toxin secretion ATP-binding protein; Doubtful CDS; enzyme. | RTX toxin ABC transporter (IM-ABC) protein RtxB; Function of strongly homologous gene; enzyme. | 0.867 |
| XBJ1_1094 | msbA | XBJ1_1094 | XBJ1_0810 | Putative RTX toxin secretion ATP-binding protein; Doubtful CDS; enzyme. | Lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.723 |
| XBJ1_1966 | XBJ1_0775 | XBJ1_1966 | XBJ1_0775 | Transposase (fragment); Gene remnant; enzyme. | Putative Ornithine racemase. | 0.999 |
| XBJ1_1966 | XBJ1_1968 | XBJ1_1966 | XBJ1_1968 | Transposase (fragment); Gene remnant; enzyme. | Putative Ornithine racemase. | 0.999 |
| XBJ1_1966 | XBJ1_2152 | XBJ1_1966 | XBJ1_2152 | Transposase (fragment); Gene remnant; enzyme. | Peptide synthetase XpsB. | 0.999 |
| XBJ1_1966 | msbA | XBJ1_1966 | XBJ1_0810 | Transposase (fragment); Gene remnant; enzyme. | Lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.589 |
| XBJ1_1968 | XBJ1_0775 | XBJ1_1968 | XBJ1_0775 | Putative Ornithine racemase. | Putative Ornithine racemase. | 0.999 |
| XBJ1_1968 | XBJ1_1966 | XBJ1_1968 | XBJ1_1966 | Putative Ornithine racemase. | Transposase (fragment); Gene remnant; enzyme. | 0.999 |
| XBJ1_1968 | XBJ1_2152 | XBJ1_1968 | XBJ1_2152 | Putative Ornithine racemase. | Peptide synthetase XpsB. | 0.999 |
| XBJ1_1968 | msbA | XBJ1_1968 | XBJ1_0810 | Putative Ornithine racemase. | Lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)); Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.589 |
| XBJ1_2152 | XBJ1_0775 | XBJ1_2152 | XBJ1_0775 | Peptide synthetase XpsB. | Putative Ornithine racemase. | 0.999 |
| XBJ1_2152 | XBJ1_1966 | XBJ1_2152 | XBJ1_1966 | Peptide synthetase XpsB. | Transposase (fragment); Gene remnant; enzyme. | 0.999 |
| XBJ1_2152 | XBJ1_1968 | XBJ1_2152 | XBJ1_1968 | Peptide synthetase XpsB. | Putative Ornithine racemase. | 0.999 |
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