Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XBJ1_1187 | XBJ1_1188 | XBJ1_1187 | XBJ1_1188 | Hypothetical protein. | Hypothetical protein. | 0.592 |
XBJ1_1187 | XBJ1_1189 | XBJ1_1187 | XBJ1_1189 | Hypothetical protein. | DNA replication protein gp18. | 0.592 |
XBJ1_1187 | XBJ1_1190 | XBJ1_1187 | XBJ1_1190 | Hypothetical protein. | Replicative DNA helicase (Replication protein gp12). | 0.592 |
XBJ1_1187 | XBJ1_1191 | XBJ1_1187 | XBJ1_1191 | Hypothetical protein. | Hypothetical protein. | 0.540 |
XBJ1_1187 | XBJ1_1192 | XBJ1_1187 | XBJ1_1192 | Hypothetical protein. | Hypothetical protein. | 0.540 |
XBJ1_1188 | XBJ1_1187 | XBJ1_1188 | XBJ1_1187 | Hypothetical protein. | Hypothetical protein. | 0.592 |
XBJ1_1188 | XBJ1_1189 | XBJ1_1188 | XBJ1_1189 | Hypothetical protein. | DNA replication protein gp18. | 0.773 |
XBJ1_1188 | XBJ1_1190 | XBJ1_1188 | XBJ1_1190 | Hypothetical protein. | Replicative DNA helicase (Replication protein gp12). | 0.773 |
XBJ1_1188 | XBJ1_1191 | XBJ1_1188 | XBJ1_1191 | Hypothetical protein. | Hypothetical protein. | 0.701 |
XBJ1_1188 | XBJ1_1192 | XBJ1_1188 | XBJ1_1192 | Hypothetical protein. | Hypothetical protein. | 0.701 |
XBJ1_1188 | pphA | XBJ1_1188 | XBJ1_1194 | Hypothetical protein. | Serine/threonine-specific protein phosphatase 1, signals protein misfolding. | 0.424 |
XBJ1_1188 | ybcN | XBJ1_1188 | XBJ1_1193 | Hypothetical protein. | DLP12 prophage. | 0.424 |
XBJ1_1189 | XBJ1_1187 | XBJ1_1189 | XBJ1_1187 | DNA replication protein gp18. | Hypothetical protein. | 0.592 |
XBJ1_1189 | XBJ1_1188 | XBJ1_1189 | XBJ1_1188 | DNA replication protein gp18. | Hypothetical protein. | 0.773 |
XBJ1_1189 | XBJ1_1190 | XBJ1_1189 | XBJ1_1190 | DNA replication protein gp18. | Replicative DNA helicase (Replication protein gp12). | 0.931 |
XBJ1_1189 | XBJ1_1191 | XBJ1_1189 | XBJ1_1191 | DNA replication protein gp18. | Hypothetical protein. | 0.701 |
XBJ1_1189 | XBJ1_1192 | XBJ1_1189 | XBJ1_1192 | DNA replication protein gp18. | Hypothetical protein. | 0.701 |
XBJ1_1189 | pphA | XBJ1_1189 | XBJ1_1194 | DNA replication protein gp18. | Serine/threonine-specific protein phosphatase 1, signals protein misfolding. | 0.514 |
XBJ1_1189 | ybcN | XBJ1_1189 | XBJ1_1193 | DNA replication protein gp18. | DLP12 prophage. | 0.426 |
XBJ1_1190 | XBJ1_1187 | XBJ1_1190 | XBJ1_1187 | Replicative DNA helicase (Replication protein gp12). | Hypothetical protein. | 0.592 |
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