Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XBJ1_2591 | maeB | XBJ1_2591 | XBJ1_2590 | Hypothetical protein. | Putative bifunctional: malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal). | 0.406 |
XBJ1_2591 | narP | XBJ1_2591 | XBJ1_2592 | Hypothetical protein. | Two-component system, NarL family, nitrate/nitrite response regulator NarP; Response regulator in two-component regulatory system with NarQ (or NarX), regulates anaerobic respiratory gene expression. | 0.516 |
maeB | XBJ1_2591 | XBJ1_2590 | XBJ1_2591 | Putative bifunctional: malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal). | Hypothetical protein. | 0.406 |
narP | XBJ1_2591 | XBJ1_2592 | XBJ1_2591 | Two-component system, NarL family, nitrate/nitrite response regulator NarP; Response regulator in two-component regulatory system with NarQ (or NarX), regulates anaerobic respiratory gene expression. | Hypothetical protein. | 0.516 |