XBJ1_3466 protein (Xenorhabdus bovienii) - STRING interaction network

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Score

XBJ1_3466

Putative ATPase component of ABC transporters with duplicated ATPase domains. (545 aa)

Predicted Functional Partners:

rplU

0.681

rpsO

0.674

rpsC

0.674

rplM

0.671

rplC

0.668

rpmF

0.662

rpmD

0.662

rplR

0.662

rpmH

0.662

rplP

0.661

Your Current Organism:

Xenorhabdus bovienii

NCBI taxonomy Id: 406818
Other names: X. bovienii SS-2004, Xenorhabdus bovienii SS-2004, Xenorhabdus bovienii str. SS-2004, Xenorhabdus bovienii strain SS-2004

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XBJ1_3466	rplC	XBJ1_3466	XBJ1_4241	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.668
XBJ1_3466	rplM	XBJ1_3466	XBJ1_3844	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.671
XBJ1_3466	rplP	XBJ1_3466	XBJ1_4234	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.661
XBJ1_3466	rplR	XBJ1_3466	XBJ1_4225	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.662
XBJ1_3466	rplU	XBJ1_3466	XBJ1_0355	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.681
XBJ1_3466	rpmD	XBJ1_3466	XBJ1_4223	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L30.	0.662
XBJ1_3466	rpmF	XBJ1_3466	XBJ1_2863	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.662
XBJ1_3466	rpmH	XBJ1_3466	XBJ1_4413	Putative ATPase component of ABC transporters with duplicated ATPase domains.	50S ribosomal subunit protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.662
XBJ1_3466	rpsC	XBJ1_3466	XBJ1_4235	Putative ATPase component of ABC transporters with duplicated ATPase domains.	30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.674
XBJ1_3466	rpsO	XBJ1_3466	XBJ1_0371	Putative ATPase component of ABC transporters with duplicated ATPase domains.	30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.674
rplC	XBJ1_3466	XBJ1_4241	XBJ1_3466	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Putative ATPase component of ABC transporters with duplicated ATPase domains.	0.668
rplC	rplM	XBJ1_4241	XBJ1_3844	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplP	XBJ1_4241	XBJ1_4234	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplC	rplR	XBJ1_4241	XBJ1_4225	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplC	rplU	XBJ1_4241	XBJ1_0355	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplC	rpmD	XBJ1_4241	XBJ1_4223	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L30.	0.999
rplC	rpmF	XBJ1_4241	XBJ1_2863	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.985
rplC	rpmH	XBJ1_4241	XBJ1_4413	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal subunit protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.966
rplC	rpsC	XBJ1_4241	XBJ1_4235	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplC	rpsO	XBJ1_4241	XBJ1_0371	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997