Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XBJ1_1850 | thiG | XBJ1_1850 | XBJ1_4032 | Hypothetical protein. | Thiamin biosynthesis enzyme subunit, with ThiH; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.810 |
XBJ1_1850 | ygdL | XBJ1_1850 | XBJ1_3707 | Hypothetical protein. | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | 0.404 |
XBJ1_3705 | mltA | XBJ1_3705 | XBJ1_3706 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.773 |
XBJ1_3705 | ygdL | XBJ1_3705 | XBJ1_3707 | Hypothetical protein. | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | 0.511 |
XBJ1_3708 | ygdL | XBJ1_3708 | XBJ1_3707 | Conserved hypothetical protein. | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | 0.460 |
mltA | XBJ1_3705 | XBJ1_3706 | XBJ1_3705 | Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | Hypothetical protein. | 0.773 |
mltA | ygdL | XBJ1_3706 | XBJ1_3707 | Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | 0.569 |
thiG | XBJ1_1850 | XBJ1_4032 | XBJ1_1850 | Thiamin biosynthesis enzyme subunit, with ThiH; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Hypothetical protein. | 0.810 |
thiG | ygdL | XBJ1_4032 | XBJ1_3707 | Thiamin biosynthesis enzyme subunit, with ThiH; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | 0.442 |
ygdL | XBJ1_1850 | XBJ1_3707 | XBJ1_1850 | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | Hypothetical protein. | 0.404 |
ygdL | XBJ1_3705 | XBJ1_3707 | XBJ1_3705 | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | Hypothetical protein. | 0.511 |
ygdL | XBJ1_3708 | XBJ1_3707 | XBJ1_3708 | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | Conserved hypothetical protein. | 0.460 |
ygdL | mltA | XBJ1_3707 | XBJ1_3706 | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.569 |
ygdL | thiG | XBJ1_3707 | XBJ1_4032 | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | Thiamin biosynthesis enzyme subunit, with ThiH; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.442 |
ygdL | ypfI | XBJ1_3707 | XBJ1_2598 | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | Putative acyl-CoA N-acyltransferase with nucleoside triphosphate hydrolase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.537 |
ypfI | ygdL | XBJ1_2598 | XBJ1_3707 | Putative acyl-CoA N-acyltransferase with nucleoside triphosphate hydrolase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | Putative Molybdenum cofactor biosynthesis protein MoeB, NAD(P)-binding. | 0.537 |