STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ32626.1Putative exodeoxyribonuclease V, gamma subunit. (1024 aa)    
Predicted Functional Partners:
recB
Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]
 
 
 0.990
ACZ32641.1
Putative exodeoxyribonuclease V, alpha subunit.
 
 
 0.858
pmp19
Polymorphic outer membrane protein family; Belongs to the PMP outer membrane protein family.
  
     0.772
pmp20
Polymorphic outer membrane protein family; Belongs to the PMP outer membrane protein family.
  
     0.771
ACZ32897.1
Putative permease, YjgP/YjgQ family.
  
     0.770
yrrC
Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
 
 
 0.770
pmp10-5
Outer membrane protein 5; Belongs to the PMP outer membrane protein family.
  
     0.762
ACZ32625.1
Transporter, major facilitator family.
 
     0.758
ACZ33268.1
Putative lipoprotein.
  
     0.758
ACZ33206.1
Putative membrane protein.
  
     0.757
Your Current Organism:
Chlamydia pneumoniae
NCBI taxonomy Id: 406984
Other names: C. pneumoniae LPCoLN, Chlamydia pneumoniae LPCoLN, Chlamydophila pneumoniae LPCoLN, Chlamydophila pneumoniae str. LPCoLN, Chlamydophila pneumoniae strain LPCoLN
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