STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16434.1COG3218 ABC-type uncharacterized transport system, auxiliary component. (203 aa)    
Predicted Functional Partners:
AMK16435.1
Mammalian cell entry domain-containing protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
   0.944
AMK16436.1
Fe(3+)-transporting ATPase; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
    0.885
AMK16437.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
  
 0.884
AMK16992.1
Hypothetical protein.
  
     0.771
AMK16438.1
HAD superfamily hydrolase; COG0560 Phosphoserine phosphatase.
 
     0.760
AMK17482.1
Hypothetical protein.
  
     0.756
AMK17772.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
  
     0.749
AMK16730.1
COG1846 Transcriptional regulators.
  
     0.741
AMK18815.1
Hypothetical protein.
  
     0.740
AMK16515.1
Polysaccharide biosynthesis protein.
  
     0.739
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.