STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16675.1Ammonium transporter; COG0004 Ammonia permease. (444 aa)    
Predicted Functional Partners:
AMK16676.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 
 0.997
AMK18245.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 
 0.993
AMK19460.1
COG0067 Glutamate synthase domain 1.
 
  
 0.829
AMK17885.1
COG3852 Signal transduction histidine kinase, nitrogen specific.
  
 
 0.614
AMK16678.1
Peptidase U62 modulator of DNA gyrase; COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
       0.514
AMK17585.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.506
nadE-2
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.487
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.487
AMK16677.1
COG3803 Uncharacterized protein conserved in bacteria.
       0.472
AMK17387.1
COG0642 Signal transduction histidine kinase.
  
  
 0.452
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.