STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16702.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
AMK16698.1
COG3948 Phage-related baseplate assembly protein.
       0.815
AMK16699.1
Phage-related tail protein; COG4385 Bacteriophage P2-related tail formation protein.
       0.815
AMK16700.1
Putative phage tail protein.
       0.808
AMK16701.1
Putative phage tail fiber protein.
       0.769
AMK16697.1
Hypothetical protein.
       0.517
AMK16703.1
COG0338 Site-specific DNA methylase.
       0.461
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.