Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMK16582.1 | AMK16763.1 | K663_00945 | K663_01855 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | 0.735 |
AMK16582.1 | AMK18505.1 | K663_00945 | K663_10635 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.681 |
AMK16763.1 | AMK16582.1 | K663_01855 | K663_00945 | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.735 |
AMK16763.1 | AMK16764.1 | K663_01855 | K663_01860 | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | Oligopeptide transporter OPT; COG1297 Predicted membrane protein. | 0.422 |
AMK16763.1 | AMK18504.1 | K663_01855 | K663_10630 | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.538 |
AMK16763.1 | AMK18505.1 | K663_01855 | K663_10635 | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | Hypothetical protein. | 0.420 |
AMK16763.1 | AMK20186.1 | K663_01855 | K663_19126 | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.781 |
AMK16764.1 | AMK16763.1 | K663_01860 | K663_01855 | Oligopeptide transporter OPT; COG1297 Predicted membrane protein. | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | 0.422 |
AMK18504.1 | AMK16763.1 | K663_10630 | K663_01855 | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | 0.538 |
AMK18504.1 | AMK18505.1 | K663_10630 | K663_10635 | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.940 |
AMK18505.1 | AMK16582.1 | K663_10635 | K663_00945 | Hypothetical protein. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.681 |
AMK18505.1 | AMK16763.1 | K663_10635 | K663_01855 | Hypothetical protein. | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | 0.420 |
AMK18505.1 | AMK18504.1 | K663_10635 | K663_10630 | Hypothetical protein. | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.940 |
AMK18505.1 | AMK20186.1 | K663_10635 | K663_19126 | Hypothetical protein. | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.747 |
AMK20186.1 | AMK16763.1 | K663_19126 | K663_01855 | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase). | 0.781 |
AMK20186.1 | AMK18505.1 | K663_19126 | K663_10635 | TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.747 |