STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16782.1Relaxase/mobilization nuclease. (498 aa)    
Predicted Functional Partners:
AMK16781.1
Hypothetical protein.
       0.773
AMK17114.1
Hypothetical protein.
  
     0.703
AMK16838.1
Transposase of ISsp1.
  
     0.681
AMK20195.1
parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
     0.627
AMK19680.1
COG5534 Plasmid replication initiator protein.
  
     0.606
AMK17093.1
COG3547 Transposase and inactivated derivatives.
  
     0.604
AMK17115.1
PepSY-associated TM helix family protein; COG3182 Uncharacterized iron-regulated membrane protein.
  
     0.589
AMK20194.1
COG1192 ATPases involved in chromosome partitioning.
  
     0.573
AMK16770.1
Hypothetical protein.
  
     0.547
AMK16785.1
COG4268 McrBC 5-methylcytosine restriction system component.
  
     0.509
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.