Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMK16850.1 | AMK16851.1 | K663_02305 | K663_02310 | Hypothetical protein. | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 0.955 |
AMK16850.1 | AMK16852.1 | K663_02305 | K663_02315 | Hypothetical protein. | Hypothetical protein. | 0.812 |
AMK16850.1 | AMK16853.1 | K663_02305 | K663_02320 | Hypothetical protein. | SNF2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.982 |
AMK16851.1 | AMK16850.1 | K663_02310 | K663_02305 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | Hypothetical protein. | 0.955 |
AMK16851.1 | AMK16852.1 | K663_02310 | K663_02315 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | Hypothetical protein. | 0.812 |
AMK16851.1 | AMK16853.1 | K663_02310 | K663_02320 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | SNF2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.921 |
AMK16851.1 | AMK17476.1 | K663_02310 | K663_05455 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | COG2825 Outer membrane protein. | 0.491 |
AMK16851.1 | AMK18762.1 | K663_02310 | K663_11915 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | COG3568 Metal-dependent hydrolase. | 0.401 |
AMK16851.1 | rpsF | K663_02310 | K663_10045 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.426 |
AMK16851.1 | tolB | K663_02310 | K663_15670 | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.708 |
AMK16852.1 | AMK16850.1 | K663_02315 | K663_02305 | Hypothetical protein. | Hypothetical protein. | 0.812 |
AMK16852.1 | AMK16851.1 | K663_02315 | K663_02310 | Hypothetical protein. | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 0.812 |
AMK16852.1 | AMK16853.1 | K663_02315 | K663_02320 | Hypothetical protein. | SNF2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.813 |
AMK16853.1 | AMK16850.1 | K663_02320 | K663_02305 | SNF2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Hypothetical protein. | 0.982 |
AMK16853.1 | AMK16851.1 | K663_02320 | K663_02310 | SNF2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 0.921 |
AMK16853.1 | AMK16852.1 | K663_02320 | K663_02315 | SNF2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | Hypothetical protein. | 0.813 |
AMK17476.1 | AMK16851.1 | K663_05455 | K663_02310 | COG2825 Outer membrane protein. | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 0.491 |
AMK17476.1 | rpsF | K663_05455 | K663_10045 | COG2825 Outer membrane protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.529 |
AMK18762.1 | AMK16851.1 | K663_11915 | K663_02310 | COG3568 Metal-dependent hydrolase. | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 0.401 |
rpsF | AMK16851.1 | K663_10045 | K663_02310 | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | OmpA/MotB domain-containing protein; COG1360 Flagellar motor protein. | 0.426 |
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