STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16857.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (758 aa)    
Predicted Functional Partners:
AMK16856.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.773
AMK17184.1
TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.724
AMK19647.1
anti-FecI sigma factor FecR; COG3712 Fe2+-dicitrate sensor, membrane component.
 
    0.644
AMK17155.1
Iron complex outermembrane receptor protein; COG4774 Outer membrane receptor for monomeric catechols.
  
  
 0.638
AMK17107.1
anti-FecI sigma factor FecR; COG3712 Fe2+-dicitrate sensor, membrane component.
 
  
 0.627
AMK19082.1
COG4206 Outer membrane cobalamin receptor protein.
  
   
 0.610
AMK20186.1
TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.607
AMK17171.1
COG4206 Outer membrane cobalamin receptor protein.
  
  
 0.587
AMK17632.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.586
AMK19646.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.574
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.