STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16891.1Signal peptide-containing protein. (480 aa)    
Predicted Functional Partners:
AMK19800.1
Hypothetical protein.
  
     0.697
AMK16892.1
Hypothetical protein.
       0.668
AMK19837.1
Hypothetical protein.
  
     0.667
AMK19969.1
Hypothetical protein.
  
     0.662
AMK19962.1
Hypothetical protein.
  
     0.656
AMK19823.1
Hypothetical protein.
  
     0.624
AMK19975.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
  
     0.622
AMK19854.1
Hypothetical protein.
  
     0.619
AMK19796.1
Hypothetical protein; COG4308 Limonene-1,2-epoxide hydrolase.
  
     0.614
AMK19921.1
Luciferase-like monooxygenase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
  
     0.614
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.