STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK16899.1Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (178 aa)    
Predicted Functional Partners:
AMK16900.1
Hypothetical protein.
       0.543
AMK16542.1
5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.524
AMK18960.1
COG1216 Predicted glycosyltransferases.
  
  
 0.489
AMK19688.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
 0.482
recF
Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
       0.457
AMK18057.1
Putative outer membrane phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
       0.426
AMK17846.1
Nitric oxide dioxygenase; COG1017 Hemoglobin-like flavoprotein; Belongs to the globin family.
      
 0.414
AMK19442.1
Bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; COG1017 Hemoglobin-like flavoprotein.
      
 0.414
AMK16622.1
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
  
 0.400
AMK18098.1
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
  
 0.400
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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