Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMK17069.1 | AMK17070.1 | K663_03400 | K663_03405 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.568 |
AMK17069.1 | AMK17071.1 | K663_03400 | K663_03410 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.500 |
AMK17069.1 | AMK17072.1 | K663_03400 | K663_03415 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.500 |
AMK17070.1 | AMK17069.1 | K663_03405 | K663_03400 | Hypothetical protein. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.568 |
AMK17070.1 | AMK17071.1 | K663_03405 | K663_03410 | Hypothetical protein. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.821 |
AMK17070.1 | AMK17072.1 | K663_03405 | K663_03415 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AMK17071.1 | AMK17069.1 | K663_03410 | K663_03400 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.500 |
AMK17071.1 | AMK17070.1 | K663_03410 | K663_03405 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Hypothetical protein. | 0.821 |
AMK17071.1 | AMK17072.1 | K663_03410 | K663_03415 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Hypothetical protein. | 0.773 |
AMK17072.1 | AMK17069.1 | K663_03415 | K663_03400 | Hypothetical protein. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.500 |
AMK17072.1 | AMK17070.1 | K663_03415 | K663_03405 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AMK17072.1 | AMK17071.1 | K663_03415 | K663_03410 | Hypothetical protein. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.773 |