STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK17198.1COG0642 Signal transduction histidine kinase. (531 aa)    
Predicted Functional Partners:
AMK17199.1
Winged helix family two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 0.997
AMK20002.1
COG0642 Signal transduction histidine kinase.
 
 
0.940
AMK19096.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.930
AMK18852.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.924
AMK17627.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.907
AMK17626.1
Two-component system sensor sporulation kinase C; COG0642 Signal transduction histidine kinase.
 
 
 0.906
AMK18777.1
COG0642 Signal transduction histidine kinase.
 
 
 0.894
AMK17175.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
  
 
 0.889
AMK17299.1
Two-component system phosphate regulon response regulator PhoB; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.838
AMK17420.1
Two-component system response regulator OmpR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.834
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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