STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK17218.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
AMK17217.1
3-demethylubiquinone-9 3-methyltransferase; COG3865 Uncharacterized protein conserved in bacteria.
    0.959
AMK17216.1
Bleomycin resistance protein; COG3324 Predicted enzyme related to lactoylglutathione lyase.
 
     0.861
AMK17215.1
Hypothetical protein.
 
     0.823
AMK17214.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG3607 Predicted lactoylglutathione lyase.
 
     0.693
AMK18838.1
COG0640 Predicted transcriptional regulators.
 
  
 0.641
AMK17213.1
COG1733 Predicted transcriptional regulators.
 
     0.508
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
       0.422
AMK20068.1
COG0625 Glutathione S-transferase.
 
   
 0.421
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.