STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK17387.1COG0642 Signal transduction histidine kinase. (252 aa)    
Predicted Functional Partners:
AMK18852.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.984
AMK18777.1
COG0642 Signal transduction histidine kinase.
 
 
 0.978
AMK19717.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.977
AMK19180.1
Two-component system sensor kinase CheA; COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.968
AMK17627.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.964
AMK19686.1
Histidine kinase-response regulator hybrid protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.932
AMK20002.1
COG0642 Signal transduction histidine kinase.
 
 
 0.903
AMK19379.1
COG0642 Signal transduction histidine kinase.
 
 
 0.897
AMK19020.1
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.879
AMK17626.1
Two-component system sensor sporulation kinase C; COG0642 Signal transduction histidine kinase.
 
 
0.877
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.