STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK17563.1GCN5-like N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (285 aa)    
Predicted Functional Partners:
AMK17573.1
Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily).
 
    0.782
AMK17562.1
Succinate semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
     
 0.777
AMK17571.1
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
     0.764
AMK17572.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.760
AMK17567.1
Hypothetical protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
     0.744
AMK17565.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.710
AMK17566.1
BFD domain protein (2Fe-2S)-binding domain protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.708
AMK17560.1
Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.699
AMK17568.1
Oligopeptide/dipeptide ABC transporter ATPase subunit; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
    0.696
AMK17569.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
     0.668
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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