STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK18854.1COG3741 N-formylglutamate amidohydrolase. (125 aa)    
Predicted Functional Partners:
AMK18247.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 0.944
AMK19180.1
Two-component system sensor kinase CheA; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 
 0.832
AMK17912.1
COG0642 Signal transduction histidine kinase.
 
 
 0.725
AMK18855.1
CheY-like response regulator; COG0784 FOG: CheY-like receiver.
       0.715
AMK17885.1
COG3852 Signal transduction histidine kinase, nitrogen specific.
 
 
 0.696
AMK18777.1
COG0642 Signal transduction histidine kinase.
 
 
 0.688
AMK16472.1
CheY-like response regulator; COG0784 FOG: CheY-like receiver.
  
 
 0.623
AMK17699.1
Winged helix family two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.619
AMK17592.1
Winged helix family two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 
 0.571
AMK19096.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.567
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.