STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK19079.1COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components. (259 aa)    
Predicted Functional Partners:
AMK19080.1
COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.999
AMK19081.1
COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.998
AMK17171.1
COG4206 Outer membrane cobalamin receptor protein.
 
  
 0.699
AMK19082.1
COG4206 Outer membrane cobalamin receptor protein.
 
   
 0.678
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
    
 0.604
AMK20044.1
precorrin-6Y C5,15-methyltransferase; COG2241 Precorrin-6B methylase 1.
  
  
 0.569
lolD
ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  
0.564
AMK16617.1
ABC transporter-like protein; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.
  
     0.455
AMK17379.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
0.425
AMK18093.1
ABC transporter-like protein; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.
  
     0.425
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.