STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK19195.1COG0438 Glycosyltransferase. (432 aa)    
Predicted Functional Partners:
AMK19194.1
COG3563 Capsule polysaccharide export protein.
    0.915
AMK19193.1
COG3562 Capsule polysaccharide export protein.
 
   
 0.863
AMK18953.1
ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.804
AMK18952.1
COG3524 Capsule polysaccharide export protein.
 
    0.777
AMK18965.1
COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 
 0.758
AMK18957.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.742
AMK19196.1
Histidine triad (HIT) protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
  
    0.636
AMK19197.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
       0.621
AMK19198.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
       0.621
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.605
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.