STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK19258.1COG3038 Cytochrome B561; Belongs to the UPF0312 family. (409 aa)    
Predicted Functional Partners:
AMK19259.1
COG0628 Predicted permease.
  
    0.643
AMK19257.1
Thioesterase superfamily protein; COG0824 Predicted thioesterase.
       0.497
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.485
AMK17776.1
Hypothetical protein; Belongs to the UPF0312 family.
 
  
0.465
AMK18238.1
COG1835 Predicted acyltransferases.
  
     0.460
AMK19688.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
       0.447
AMK16905.1
Putative protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
    0.424
AMK19829.1
Hypothetical protein.
 
  
 0.414
AMK19854.1
Hypothetical protein.
 
  
 0.401
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.