STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK19609.1Phage integrase family protein; COG0582 Integrase. (405 aa)    
Predicted Functional Partners:
AMK19608.1
Phage integrase family protein; COG0582 Integrase.
     0.947
AMK19607.1
Integrase family protein; COG0582 Integrase.
 
    
0.852
AMK18894.1
Phage integrase family protein; COG0582 Integrase.
     0.776
AMK18198.1
PRTRC system ParB family protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
    0.621
AMK19669.1
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
   
 0.605
AMK19610.1
Hypothetical protein.
       0.545
AMK19611.1
Hypothetical protein.
       0.545
AMK16432.1
parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
    0.478
AMK17333.1
COG1040 Predicted amidophosphoribosyltransferases.
   
    0.414
AMK16431.1
COG1192 ATPases involved in chromosome partitioning.
 
   
 0.412
Your Current Organism:
Sphingobium sp. MI1205
NCBI taxonomy Id: 407020
Other names: S. sp. MI1205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.