Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMK19923.1 | AMK19924.1 | K663_17811 | K663_17816 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.501 |
AMK19923.1 | AMK19925.1 | K663_17811 | K663_17821 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG2124 Cytochrome P450. | 0.498 |
AMK19923.1 | AMK19926.1 | K663_17811 | K663_17826 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.489 |
AMK19923.1 | AMK19927.1 | K663_17811 | K663_17831 | COG1629 Outer membrane receptor proteins, mostly Fe transport. | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.413 |
AMK19924.1 | AMK19923.1 | K663_17816 | K663_17811 | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.501 |
AMK19924.1 | AMK19925.1 | K663_17816 | K663_17821 | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | COG2124 Cytochrome P450. | 0.798 |
AMK19924.1 | AMK19926.1 | K663_17816 | K663_17826 | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.751 |
AMK19924.1 | AMK19927.1 | K663_17816 | K663_17831 | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.496 |
AMK19925.1 | AMK19923.1 | K663_17821 | K663_17811 | COG2124 Cytochrome P450. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.498 |
AMK19925.1 | AMK19924.1 | K663_17821 | K663_17816 | COG2124 Cytochrome P450. | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.798 |
AMK19925.1 | AMK19926.1 | K663_17821 | K663_17826 | COG2124 Cytochrome P450. | Hypothetical protein. | 0.757 |
AMK19925.1 | AMK19927.1 | K663_17821 | K663_17831 | COG2124 Cytochrome P450. | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.489 |
AMK19926.1 | AMK19923.1 | K663_17826 | K663_17811 | Hypothetical protein. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.489 |
AMK19926.1 | AMK19924.1 | K663_17826 | K663_17816 | Hypothetical protein. | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.751 |
AMK19926.1 | AMK19925.1 | K663_17826 | K663_17821 | Hypothetical protein. | COG2124 Cytochrome P450. | 0.757 |
AMK19926.1 | AMK19927.1 | K663_17826 | K663_17831 | Hypothetical protein. | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.499 |
AMK19927.1 | AMK19923.1 | K663_17831 | K663_17811 | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.413 |
AMK19927.1 | AMK19924.1 | K663_17831 | K663_17816 | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.496 |
AMK19927.1 | AMK19925.1 | K663_17831 | K663_17821 | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | COG2124 Cytochrome P450. | 0.489 |
AMK19927.1 | AMK19926.1 | K663_17831 | K663_17826 | araC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.499 |