Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK46698.1 | SEK46748.1 | SAMN05661044_00312 | SAMN05661044_00313 | FecR family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.606 |
SEK46698.1 | SEK46793.1 | SAMN05661044_00312 | SAMN05661044_00314 | FecR family protein. | Starch-binding associating with outer membrane. | 0.579 |
SEK46698.1 | SEK46844.1 | SAMN05661044_00312 | SAMN05661044_00315 | FecR family protein. | Alpha-mannosidase. | 0.493 |
SEK46698.1 | SEK46896.1 | SAMN05661044_00312 | SAMN05661044_00316 | FecR family protein. | Lysophospholipase L1. | 0.494 |
SEK46698.1 | SEK46938.1 | SAMN05661044_00312 | SAMN05661044_00317 | FecR family protein. | Alpha-1,2-mannosidase, putative. | 0.493 |
SEK46698.1 | SEK46976.1 | SAMN05661044_00312 | SAMN05661044_00318 | FecR family protein. | Alpha-1,2-mannosidase, putative. | 0.407 |
SEK46748.1 | SEK46698.1 | SAMN05661044_00313 | SAMN05661044_00312 | TonB-linked outer membrane protein, SusC/RagA family. | FecR family protein. | 0.606 |
SEK46748.1 | SEK46793.1 | SAMN05661044_00313 | SAMN05661044_00314 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.946 |
SEK46748.1 | SEK46844.1 | SAMN05661044_00313 | SAMN05661044_00315 | TonB-linked outer membrane protein, SusC/RagA family. | Alpha-mannosidase. | 0.802 |
SEK46748.1 | SEK46896.1 | SAMN05661044_00313 | SAMN05661044_00316 | TonB-linked outer membrane protein, SusC/RagA family. | Lysophospholipase L1. | 0.746 |
SEK46748.1 | SEK46938.1 | SAMN05661044_00313 | SAMN05661044_00317 | TonB-linked outer membrane protein, SusC/RagA family. | Alpha-1,2-mannosidase, putative. | 0.746 |
SEK46748.1 | SEK46976.1 | SAMN05661044_00313 | SAMN05661044_00318 | TonB-linked outer membrane protein, SusC/RagA family. | Alpha-1,2-mannosidase, putative. | 0.600 |
SEK46748.1 | SEK47033.1 | SAMN05661044_00313 | SAMN05661044_00319 | TonB-linked outer membrane protein, SusC/RagA family. | Sialate O-acetylesterase. | 0.454 |
SEK46748.1 | SEK47074.1 | SAMN05661044_00313 | SAMN05661044_00320 | TonB-linked outer membrane protein, SusC/RagA family. | Ricin-type beta-trefoil lectin domain-like. | 0.547 |
SEK46793.1 | SEK46698.1 | SAMN05661044_00314 | SAMN05661044_00312 | Starch-binding associating with outer membrane. | FecR family protein. | 0.579 |
SEK46793.1 | SEK46748.1 | SAMN05661044_00314 | SAMN05661044_00313 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.946 |
SEK46793.1 | SEK46844.1 | SAMN05661044_00314 | SAMN05661044_00315 | Starch-binding associating with outer membrane. | Alpha-mannosidase. | 0.888 |
SEK46793.1 | SEK46896.1 | SAMN05661044_00314 | SAMN05661044_00316 | Starch-binding associating with outer membrane. | Lysophospholipase L1. | 0.796 |
SEK46793.1 | SEK46938.1 | SAMN05661044_00314 | SAMN05661044_00317 | Starch-binding associating with outer membrane. | Alpha-1,2-mannosidase, putative. | 0.746 |
SEK46793.1 | SEK46976.1 | SAMN05661044_00314 | SAMN05661044_00318 | Starch-binding associating with outer membrane. | Alpha-1,2-mannosidase, putative. | 0.600 |
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