Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK90125.1 | SEK90170.1 | SAMN05661044_01460 | SAMN05661044_01461 | AraC-type DNA-binding protein. | Choline dehydrogenase. | 0.532 |
SEK90125.1 | SEK90206.1 | SAMN05661044_01460 | SAMN05661044_01462 | AraC-type DNA-binding protein. | Betaine-aldehyde dehydrogenase. | 0.532 |
SEK90125.1 | SEK90233.1 | SAMN05661044_01460 | SAMN05661044_01463 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.532 |
SEK90125.1 | SEK90284.1 | SAMN05661044_01460 | SAMN05661044_01464 | AraC-type DNA-binding protein. | Glyoxylase, beta-lactamase superfamily II. | 0.443 |
SEK90170.1 | SEK90125.1 | SAMN05661044_01461 | SAMN05661044_01460 | Choline dehydrogenase. | AraC-type DNA-binding protein. | 0.532 |
SEK90170.1 | SEK90206.1 | SAMN05661044_01461 | SAMN05661044_01462 | Choline dehydrogenase. | Betaine-aldehyde dehydrogenase. | 0.864 |
SEK90170.1 | SEK90233.1 | SAMN05661044_01461 | SAMN05661044_01463 | Choline dehydrogenase. | Hypothetical protein. | 0.773 |
SEK90170.1 | SEK90284.1 | SAMN05661044_01461 | SAMN05661044_01464 | Choline dehydrogenase. | Glyoxylase, beta-lactamase superfamily II. | 0.641 |
SEK90206.1 | SEK90125.1 | SAMN05661044_01462 | SAMN05661044_01460 | Betaine-aldehyde dehydrogenase. | AraC-type DNA-binding protein. | 0.532 |
SEK90206.1 | SEK90170.1 | SAMN05661044_01462 | SAMN05661044_01461 | Betaine-aldehyde dehydrogenase. | Choline dehydrogenase. | 0.864 |
SEK90206.1 | SEK90233.1 | SAMN05661044_01462 | SAMN05661044_01463 | Betaine-aldehyde dehydrogenase. | Hypothetical protein. | 0.773 |
SEK90206.1 | SEK90284.1 | SAMN05661044_01462 | SAMN05661044_01464 | Betaine-aldehyde dehydrogenase. | Glyoxylase, beta-lactamase superfamily II. | 0.631 |
SEK90233.1 | SEK90125.1 | SAMN05661044_01463 | SAMN05661044_01460 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.532 |
SEK90233.1 | SEK90170.1 | SAMN05661044_01463 | SAMN05661044_01461 | Hypothetical protein. | Choline dehydrogenase. | 0.773 |
SEK90233.1 | SEK90206.1 | SAMN05661044_01463 | SAMN05661044_01462 | Hypothetical protein. | Betaine-aldehyde dehydrogenase. | 0.773 |
SEK90233.1 | SEK90284.1 | SAMN05661044_01463 | SAMN05661044_01464 | Hypothetical protein. | Glyoxylase, beta-lactamase superfamily II. | 0.631 |
SEK90233.1 | SEK90320.1 | SAMN05661044_01463 | SAMN05661044_01465 | Hypothetical protein. | Hypothetical protein; Belongs to the pirin family. | 0.400 |
SEK90284.1 | SEK90125.1 | SAMN05661044_01464 | SAMN05661044_01460 | Glyoxylase, beta-lactamase superfamily II. | AraC-type DNA-binding protein. | 0.443 |
SEK90284.1 | SEK90170.1 | SAMN05661044_01464 | SAMN05661044_01461 | Glyoxylase, beta-lactamase superfamily II. | Choline dehydrogenase. | 0.641 |
SEK90284.1 | SEK90206.1 | SAMN05661044_01464 | SAMN05661044_01462 | Glyoxylase, beta-lactamase superfamily II. | Betaine-aldehyde dehydrogenase. | 0.631 |
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