Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK93836.1 | SEL03717.1 | SAMN05661044_01552 | SAMN05661044_01802 | KTSC domain-containing protein. | Phosphatidylglycerol lysyltransferase. | 0.636 |
SEL03717.1 | SEK93836.1 | SAMN05661044_01802 | SAMN05661044_01552 | Phosphatidylglycerol lysyltransferase. | KTSC domain-containing protein. | 0.636 |
SEL03717.1 | SEL03757.1 | SAMN05661044_01802 | SAMN05661044_01803 | Phosphatidylglycerol lysyltransferase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.509 |
SEL03717.1 | SEL03797.1 | SAMN05661044_01802 | SAMN05661044_01804 | Phosphatidylglycerol lysyltransferase. | Signal transduction histidine kinase. | 0.532 |
SEL03717.1 | SEL44488.1 | SAMN05661044_01802 | SAMN05661044_02508 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.566 |
SEL03717.1 | SEL93781.1 | SAMN05661044_01802 | SAMN05661044_03800 | Phosphatidylglycerol lysyltransferase. | ABC-type molybdate transport system, substrate-binding protein. | 0.555 |
SEL03717.1 | SEM32837.1 | SAMN05661044_01802 | SAMN05661044_04886 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.569 |
SEL03717.1 | SEM45207.1 | SAMN05661044_01802 | SAMN05661044_05222 | Phosphatidylglycerol lysyltransferase. | Peptide-methionine (R)-S-oxide reductase. | 0.503 |
SEL03717.1 | SEM52738.1 | SAMN05661044_01802 | SAMN05661044_05406 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.498 |
SEL03717.1 | SEM56990.1 | SAMN05661044_01802 | SAMN05661044_05528 | Phosphatidylglycerol lysyltransferase. | Hypothetical protein. | 0.552 |
SEL03717.1 | lysS | SAMN05661044_01802 | SAMN05661044_05231 | Phosphatidylglycerol lysyltransferase. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.636 |
SEL03757.1 | SEL03717.1 | SAMN05661044_01803 | SAMN05661044_01802 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Phosphatidylglycerol lysyltransferase. | 0.509 |
SEL03757.1 | SEL03797.1 | SAMN05661044_01803 | SAMN05661044_01804 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.970 |
SEL03797.1 | SEL03717.1 | SAMN05661044_01804 | SAMN05661044_01802 | Signal transduction histidine kinase. | Phosphatidylglycerol lysyltransferase. | 0.532 |
SEL03797.1 | SEL03757.1 | SAMN05661044_01804 | SAMN05661044_01803 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.970 |
SEL44488.1 | SEL03717.1 | SAMN05661044_02508 | SAMN05661044_01802 | Hypothetical protein. | Phosphatidylglycerol lysyltransferase. | 0.566 |
SEL44488.1 | SEL93781.1 | SAMN05661044_02508 | SAMN05661044_03800 | Hypothetical protein. | ABC-type molybdate transport system, substrate-binding protein. | 0.689 |
SEL93781.1 | SEL03717.1 | SAMN05661044_03800 | SAMN05661044_01802 | ABC-type molybdate transport system, substrate-binding protein. | Phosphatidylglycerol lysyltransferase. | 0.555 |
SEL93781.1 | SEL44488.1 | SAMN05661044_03800 | SAMN05661044_02508 | ABC-type molybdate transport system, substrate-binding protein. | Hypothetical protein. | 0.689 |
SEL93781.1 | SEM56990.1 | SAMN05661044_03800 | SAMN05661044_05528 | ABC-type molybdate transport system, substrate-binding protein. | Hypothetical protein. | 0.677 |
page 1 of 2