STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL35319.1Beta-glucosidase. (794 aa)    
Predicted Functional Partners:
SEL41976.1
Beta-glucosidase.
 
  
 0.826
SEK50308.1
N-terminal ig-like domain of cellulase.
     
 0.770
SEM33397.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.714
SEK36593.1
Alpha-glucosidase.
 
  
 0.679
SEL46616.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.674
SEL86422.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
    
 0.628
SEK95744.1
Glycosidase.
  
 
 0.501
SEM08872.1
CubicO group peptidase, beta-lactamase class C family.
  
 
  0.498
SEL35285.1
Small subunit ribosomal protein S1.
       0.480
SEL94464.1
Carbohydrate binding module (family 6).
 
  
 0.458
Your Current Organism:
Pseudosphingobacterium domesticum
NCBI taxonomy Id: 407022
Other names: CCUG 54353, DSM 18733, LMG 23837, LMG:23837, Olivibacter domesticus, P. domesticum, Pseudosphingobacterium domesticum Vaz-Moreira et al. 2007 emend. Hahnke et al. 2016, strain DC-186
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.