STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL41976.1Beta-glucosidase. (443 aa)    
Predicted Functional Partners:
SEK35191.1
Microcystin-dependent protein.
   
   0.954
SEK47913.1
Uncharacterized membrane protein.
    
 0.912
SEK50308.1
N-terminal ig-like domain of cellulase.
     
 0.893
SEM33397.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 0.860
SEL46616.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
 0.859
SEL42017.1
Conserved hypothetical protein.
 
     0.851
SEL35319.1
Beta-glucosidase.
 
  
 0.826
SEL64316.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.799
SEK71570.1
Ribose 5-phosphate isomerase B.
  
 
 0.780
SEM59792.1
Ribose 5-phosphate isomerase B.
  
 
 0.780
Your Current Organism:
Pseudosphingobacterium domesticum
NCBI taxonomy Id: 407022
Other names: CCUG 54353, DSM 18733, LMG 23837, LMG:23837, Olivibacter domesticus, P. domesticum, Pseudosphingobacterium domesticum Vaz-Moreira et al. 2007 emend. Hahnke et al. 2016, strain DC-186
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.